STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02107.1Hypothetical protein. (1243 aa)    
Predicted Functional Partners:
EKY02106.1
Hypothetical protein.
       0.790
EKX99499.1
KEGG: pru:PRU_0014 5.3e-139 transglycosylase SLT/LysM domain-containing protein; K08307 membrane-bound lytic murein transglycosylase D.
    
 0.689
EKX96153.1
Peptidase, M23 family; KEGG: edi:EDI_024060 1.8e-18 trichohyalin K13173; Psort location: Cytoplasmic, score: 9.26.
  
   0.618
EKY01819.1
Peptidase, S54 family; KEGG: pmz:HMPREF0659_A6317 4.8e-90 peptidase, S54 family; Psort location: CytoplasmicMembrane, score: 10.00.
    
   0.595
EKY03811.1
Peptidase, M56 family; KEGG: scl:sce7487 9.4e-07 ftsI3; penicillin-binding transpeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
  0.553
EKY01424.1
Hypothetical protein; KEGG: apb:SAR116_0293 5.8e-30 hyopothetical protein.
    
   0.427
EKY00116.1
Outer membrane lipoprotein carrier protein LolA; KEGG: cco:CCC13826_0283 0.0038 flagellum-specific ATP synthase.
    
   0.427
EKY00029.1
Outer membrane lipoprotein carrier protein LolA.
    
   0.427
EKY02704.1
Hypothetical protein.
   
 0.406
EKX99833.1
Sporulation and cell division repeat protein; KEGG: bha:BH1294 0.0032 cwlC; N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase) K01448; Psort location: Periplasmic, score: 9.83.
   
 0.406
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.