STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01998.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (251 aa)    
Predicted Functional Partners:
EKY01999.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
       0.737
EKX96443.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.724
EKY02000.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 1.5e-13 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.707
EKX99611.1
YbbR-like protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.707
EKX98296.1
Gliding motility-associated protein GldN.
  
     0.698
EKY02890.1
DoxX family protein; KEGG: pmz:HMPREF0659_A5471 3.8e-136 tpiA; triose-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.691
EKY02091.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.668
EKX98297.1
Gliding motility-associated protein GldM.
  
     0.662
EKY03875.1
RNA methyltransferase, RsmD family; KEGG: fps:FP0986 3.1e-31 modification methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.645
EKY02705.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.624
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.