Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02018.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
EKY02017.1
Hypothetical protein.
 
    0.960
EKY03134.1
Tetratricopeptide repeat protein.
  
     0.756
EKY03549.1
VanZ-like protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.645
EKX99558.1
TonB-dependent receptor.
  
     0.644
EKX99749.1
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1915 0.0039 tyrosine recombinase XerD K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.630
EKX99559.1
SusD family protein.
  
     0.592
EKY01821.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.546
EKY01229.1
KEGG: sfu:Sfum_2744 1.8e-07 TonB-dependent receptor; K01802 peptidylprolyl isomerase; Psort location: OuterMembrane, score: 9.92.
  
     0.517
EKY02375.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.495
EKY02029.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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