Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02031.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00. (445 aa)    
Predicted Functional Partners:
EKX98398.1
Alpha amylase, catalytic domain protein; KEGG: pru:PRU_2700 8.5e-235 neopullulanase; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
    0.688
EKY02037.1
SusD family protein.
 
     0.511
EKY01628.1
Hypothetical protein; KEGG: coc:Coch_0626 1.2e-253 alpha-glucosidase; K01187 alpha-glucosidase.
 
     0.499
EKY02030.1
PAP2 family protein; KEGG: xtr:100158576 0.00029 ppapdc1b; phosphatidic acid phosphatase type 2 domain containing 1B; Psort location: CytoplasmicMembrane, score: 9.82.
       0.459
EKY02032.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.450
EKY02033.1
Sugar-binding domain protein; KEGG: dfe:Dfer_2837 1.0e-57 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.97.
 
     0.445
EKY02036.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
     0.442
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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