STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02038.1Hypothetical protein; KEGG: cja:CJA_0006 0.00056 amy13G; alpha-amylase, putative, amy13G; Psort location: Periplasmic, score: 9.84. (409 aa)    
Predicted Functional Partners:
EKY02037.1
SusD family protein.
 
  
 0.903
EKY02036.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.879
EKX98234.1
FG-GAP repeat protein; KEGG: npu:Npun_F1457 1.7e-05 putative outer membrane adhesin like proteiin; Psort location: OuterMembrane, score: 9.49.
  
 
  0.684
EKY02490.1
KEGG: npu:Npun_R5402 5.8e-06 FG-GAP repeat-containing protein; Psort location: OuterMembrane, score: 9.49.
  
 
  0.658
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
  0.647
EKY03611.1
SusD family protein.
  
  0.642
EKY02039.1
Hypothetical protein; KEGG: sau:SA0071 0.0070 kdpC, SCCmec; hypothetical protein; K01548 K+-transporting ATPase ATPase C chain; Psort location: Extracellular, score: 9.65.
  
    0.632
EKY01092.1
Hypothetical protein.
  
  0.604
EKX99559.1
SusD family protein.
 
     0.598
EKX98230.1
Hypothetical protein.
  
 
  0.596
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.