Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY02042.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EKX96940.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.768
EKY01584.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.724
EKY02041.1
KEGG: pmz:HMPREF0659_A5264 5.5e-41 ATP:cob(I)alamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.26.
       0.692
EKY03090.1
Tetratricopeptide repeat protein.
  
     0.689
EKY00009.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 7.4e-16 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
  
     0.679
EKY02040.1
Hypothetical protein.
       0.678
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
  
     0.635
EKY02994.1
HDIG domain protein; KEGG: bfs:BF3442 3.3e-178 putative polyA polymerase; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
     0.594
EKY03425.1
KEGG: pru:PRU_0992 6.8e-91 glycogen synthase-like protein; K00703 starch synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.556
EKX98348.1
Signal peptidase I; KEGG: pmz:HMPREF0659_A5068 3.9e-182 lepB; signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.
  
     0.556
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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