Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01815.1KEGG: apb:SAR116_0616 1.4e-33 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 8.96. (375 aa)    
Predicted Functional Partners:
EKX97489.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 6.8e-17 possible DNA uptake protein, ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.850
EKY01813.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.847
EKY01814.1
acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: cbd:CBUD_0478 1.1e-14 thioesterase K07107; Psort location: Cytoplasmic, score: 8.96.
  
    0.835
EKX96749.1
comF family protein; KEGG: chu:CHU_3495 6.6e-22 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.810
EKX98403.1
Mg chelatase-like protein; KEGG: chu:CHU_0354 1.7e-165 ch1I; magnesium chelatase, subunit ChlI K07391; Psort location: Cytoplasmic, score: 9.97.
 
 0.800
EKY01811.1
Hypothetical protein.
       0.613
EKY01812.1
Hypothetical protein; KEGG: fnu:FN1512 0.00053 phophatidylinositol-4-phosphate 5-kinase; Psort location: Cytoplasmic, score: 8.96.
       0.613
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
   
 0.609
EKY01809.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.579
EKY01810.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.579
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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