Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY01617.1SusD family protein. (542 aa)    
Predicted Functional Partners:
EKY01618.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
 
     0.947
EKY01619.1
Hypothetical protein; KEGG: jan:Jann_3447 0.0031 sarcosine oxidase alpha subunit family protein; K00302 sarcosine oxidase, subunit alpha; Psort location: Cytoplasmic, score: 8.96.
 
     0.821
EKY03645.1
Tat pathway signal sequence domain protein.
  
   0.807
EKY03143.1
TonB-dependent receptor plug domain protein.
  
 
   0.801
EKX97109.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.7e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
  
 
   0.797
EKY01614.1
Hypothetical protein; KEGG: eci:UTI89_C1705 0.0030 yddW; lipoprotein YddW precursor.
 
     0.796
EKY02082.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
 
   0.783
EKX97110.1
SusD family protein.
  
     0.769
EKX97111.1
Hypothetical protein.
  
  
  0.765
EKY01616.1
Hypothetical protein.
       0.763
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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