Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY01619.1Hypothetical protein; KEGG: jan:Jann_3447 0.0031 sarcosine oxidase alpha subunit family protein; K00302 sarcosine oxidase, subunit alpha; Psort location: Cytoplasmic, score: 8.96. (625 aa)    
Predicted Functional Partners:
EKY01617.1
SusD family protein.
 
     0.821
EKY01618.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
 
     0.817
EKY02979.1
KEGG: apb:SAR116_1870 8.9e-18 electron transfer flavoprotein beta-subunit K03521; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.809
EKY03645.1
Tat pathway signal sequence domain protein.
 
    0.758
EKY02978.1
KEGG: apb:SAR116_1869 2.6e-34 electron transfer flavoprotein alpha-subunit K03522; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.720
EKY01614.1
Hypothetical protein; KEGG: eci:UTI89_C1705 0.0030 yddW; lipoprotein YddW precursor.
 
     0.668
EKY01613.1
Ser/Thr phosphatase family protein; KEGG: isc:IscW_ISCW023967 0.0020 purple acid phosphatase, putative.
 
     0.654
EKY00737.1
Prenyltransferase, UbiA family; KEGG: clj:CLJU_c13310 1.8e-44 ubiA; putative 4-hydroxybenzoate polyprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.613
EKY01616.1
Hypothetical protein.
       0.602
EKY01611.1
Hypothetical protein; KEGG: pfr:PFREUD_10120 0.00017 exopolysaccharide biosynthesis protein precursor (related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor).
 
     0.569
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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