Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY01591.1KEGG: pmz:HMPREF0659_A5648 7.6e-44 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 8.96. (176 aa)    
Predicted Functional Partners:
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
 0.926
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
    
 0.839
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.682
EKY01592.1
Hypothetical protein; KEGG: bcv:Bcav_0716 8.7e-06 pantoate/beta-alanine ligase; Psort location: Cytoplasmic, score: 8.96.
       0.636
EKY01589.1
KEGG: pru:PRU_0197 3.3e-59 cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein; K01493 dCMP deaminase.
  
    0.557
EKY01590.1
KEGG: pru:PRU_0198 3.3e-208 S41 family peptidase K03797; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S41A family.
       0.553
EKY01819.1
Peptidase, S54 family; KEGG: pmz:HMPREF0659_A6317 4.8e-90 peptidase, S54 family; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.548
fhs
KEGG: bfs:BF2256 2.7e-213 fhs; formate--tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 8.96.
   
 0.509
EKY01588.1
Putative peptidyl-dipeptidase dcp; KEGG: pru:PRU_0196 7.5e-298 putative oligopeptidase A; K01284 peptidyl-dipeptidase Dcp; Psort location: Cytoplasmic, score: 9.97.
       0.498
pheT
KEGG: pru:PRU_0820 0. pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.439
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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