Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01487.1Hypothetical protein; KEGG: cwo:Cwoe_1613 7.1e-09 phosphatidylinositol alpha-mannosyltransferase K08256; Psort location: CytoplasmicMembrane, score: 10.00. (344 aa)    
Predicted Functional Partners:
EKY01488.1
Xaa-His dipeptidase; KEGG: pru:PRU_1551 1.9e-175 pepD_2; Xaa-His dipeptidase K01270; Psort location: Cytoplasmic, score: 8.96.
     
 0.811
EKX95919.1
Hypothetical protein.
  
     0.686
EKX96442.1
Hypothetical protein.
  
 
  0.661
EKY03549.1
VanZ-like protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.622
EKY01486.1
Hypothetical protein.
       0.553
EKY01489.1
Hypothetical protein.
       0.548
EKY01236.1
Hypothetical protein.
 
     0.547
EKY01490.1
Radical SAM domain protein; KEGG: mru:mru_1965 2.2e-37 pflA2; pyruvate formate-lyase-activating enzyme PflA2; Psort location: Cytoplasmic, score: 9.97.
       0.539
EKY03134.1
Tetratricopeptide repeat protein.
  
     0.533
EKX99725.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aci:ACIAD0595 3.8e-11 putative sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.516
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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