Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01424.1Hypothetical protein; KEGG: apb:SAR116_0293 5.8e-30 hyopothetical protein. (258 aa)    
Predicted Functional Partners:
EKY01423.1
Hypothetical protein.
 
     0.958
EKY01425.1
Hypothetical protein; KEGG: apb:SAR116_0292 6.7e-41 exporter of the RND superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.943
EKY01426.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
     0.690
EKX96154.1
Hypothetical protein.
    
 
 0.679
EKY00015.1
Efflux ABC transporter, permease protein; KEGG: apb:SAR116_0522 6.4e-31 ABC-type transport system, permease component K09808; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 
 0.582
EKY02904.1
Efflux ABC transporter, permease protein; KEGG: apb:SAR116_0522 1.9e-19 ABC-type transport system, permease component K09808; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.528
EKX99861.1
KEGG: ppr:PBPRB1124 1.4e-19 putative ABC transporter, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
   
 
 0.498
EKX98496.1
Transporter, DASS family; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.498
EKY01427.1
Hypothetical protein.
       0.445
EKY00585.1
ABC transporter, ATP-binding protein; KEGG: ttu:TERTU_4674 4.6e-69 macrolide export ATP-binding/permease protein MacB K02003; Psort location: CytoplasmicMembrane, score: 9.99.
    
 
 0.442
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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