Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01216.1Hypothetical protein; KEGG: gym:GYMC10_5641 0.00042 N-acetylglucosamine kinase; Psort location: Cytoplasmic, score: 8.96. (280 aa)    
Predicted Functional Partners:
EKY02891.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.730
EKY00010.1
Outer membrane protein.
  
     0.679
EKX99627.1
Hypothetical protein.
  
 
   0.673
EKY02890.1
DoxX family protein; KEGG: pmz:HMPREF0659_A5471 3.8e-136 tpiA; triose-phosphate isomerase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.657
EKY00546.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.592
EKX99118.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.580
EKX95919.1
Hypothetical protein.
  
     0.580
EKY04058.1
TonB-dependent receptor; KEGG: ddd:Dda3937_04300 0.00016 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 9.52.
  
     0.560
EKX99555.1
Hypothetical protein.
  
    0.531
EKX97109.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.7e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
  
    0.510
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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