Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY01123.1TrkA protein; KEGG: ctu:Ctu_3p00400 1.1e-08 arsB; arsenical pump membrane protein K03893; Psort location: CytoplasmicMembrane, score: 10.00. (610 aa)    
Predicted Functional Partners:
EKX98575.1
KEGG: shn:Shewana3_0031 7.6e-76 TrkH family potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.818
EKX99565.1
KEGG: pmz:HMPREF0659_A6863 0. malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.575
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.574
EKY01122.1
Hypothetical protein.
       0.546
EKY02824.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.540
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.527
EKY01437.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dfe:Dfer_1574 2.4e-80 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.507
EKX98908.1
Calcium-translocating P-type ATPase, PMCA-type; KEGG: bfs:BF4149 8.1e-246 putative transmembrane calcium-transporting ATPase K01537; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.485
EKX96221.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_0792 2.5e-148 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.467
EKY01124.1
KEGG: pmz:HMPREF0659_A5379 6.4e-150 fba; fructose-1,6-bisphosphate aldolase, class II K01624; Psort location: Cytoplasmic, score: 9.97.
       0.427
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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