STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01010.1Hypothetical protein; KEGG: str:Sterm_2944 1.4e-09 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96. (295 aa)    
Predicted Functional Partners:
EKY01008.1
Hypothetical protein; KEGG: tin:Tint_2201 1.0e-12 DNA topoisomerase.
 
    0.941
EKY01009.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.903
EKX95911.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.797
EKX95907.1
Hypothetical protein; KEGG: tin:Tint_2201 2.2e-12 DNA topoisomerase.
 
    0.745
EKY02076.1
Hypothetical protein; KEGG: tin:Tint_2201 1.0e-05 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.720
EKY01011.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.712
EKY03860.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
   
 0.644
EKX97337.1
Hypothetical protein; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family.
   
 0.644
EKX95908.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.606
EKY01012.1
DNA binding domain, excisionase family; KEGG: pmj:P9211_09491 0.0013 ABC transporter ATPase K02013.
 
     0.592
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.