STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01012.1DNA binding domain, excisionase family; KEGG: pmj:P9211_09491 0.0013 ABC transporter ATPase K02013. (118 aa)    
Predicted Functional Partners:
EKY01011.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.910
EKY01009.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.797
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.779
EKY00740.1
GtrA-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.743
EKY01008.1
Hypothetical protein; KEGG: tin:Tint_2201 1.0e-12 DNA topoisomerase.
 
     0.689
EKX96161.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.680
EKY00736.1
Acyltransferase; KEGG: mbo:Mb1286 3.7e-10 acyltransferase K00680; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.649
EKX95908.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.628
EKY02076.1
Hypothetical protein; KEGG: tin:Tint_2201 1.0e-05 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.603
EKX99217.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.595
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.