STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY01022.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96. (198 aa)    
Predicted Functional Partners:
EKY01021.1
Hypothetical protein.
       0.795
EKY01020.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.637
EKY01019.1
Pseudouridine synthase, RluA family; KEGG: pmz:HMPREF0659_A6738 3.1e-86 RNA pseudouridine synthase K06180; Psort location: Cytoplasmic, score: 9.97.
  
    0.501
EKY03427.1
Hypothetical protein.
  
     0.484
EKY00006.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
     0.455
EKX99833.1
Sporulation and cell division repeat protein; KEGG: bha:BH1294 0.0032 cwlC; N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase) K01448; Psort location: Periplasmic, score: 9.83.
  
     0.440
EKY01023.1
Hypothetical protein.
       0.429
EKY02652.1
Tetratricopeptide repeat protein.
  
     0.418
EKY01024.1
Hypothetical protein.
       0.416
EKX98594.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.