Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY00977.1Hypothetical protein; KEGG: isc:IscW_ISCW021353 1.6e-06 involucrin, putative. (140 aa)    
Predicted Functional Partners:
EKY03677.1
Hypothetical protein.
  
 
 0.583
EKY00978.1
Hypothetical protein; KEGG: chu:CHU_2225 0.00013 gliding motility-related protein; adhesin AidA-related.
       0.571
EKY00979.1
BNR/Asp-box repeat protein; KEGG: sus:Acid_0193 0.00018 exo-alpha-sialidase K01186.
       0.556
EKX96117.1
KEGG: fsu:Fisuc_0992 7.7e-122 phosphonopyruvate decarboxylase; K09459 phosphonopyruvate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
  
     0.435
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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