Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY00993.1Fibronectin type III domain protein; KEGG: cyj:Cyan7822_1097 0.0078 N-acetylmuramoyl-L-alanine amidase. (887 aa)    
Predicted Functional Partners:
EKY00991.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00250 4.1e-109 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.934
EKY00992.1
PQQ enzyme repeat protein; KEGG: sti:Sthe_1246 4.4e-18 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial.
 
     0.933
EKY00994.1
Transporter, SSS family; KEGG: hiq:CGSHiGG_00405 4.5e-07 cytidine deaminase K11928; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.778
EKY00995.1
Hypothetical protein.
       0.741
EKY00988.1
Hypothetical protein; KEGG: sli:Slin_6587 1.5e-38 heparan-alpha-glucosaminide N-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.718
EKX99499.1
KEGG: pru:PRU_0014 5.3e-139 transglycosylase SLT/LysM domain-containing protein; K08307 membrane-bound lytic murein transglycosylase D.
    
 0.689
EKY04269.1
SpoIID/LytB domain protein; KEGG: ssp:SSP0631 0.0096 galactose-1-phosphate uridylyltransferase K00964; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.674
EKY02704.1
Hypothetical protein.
  
 0.612
EKY00990.1
Hypothetical protein; KEGG: rcu:RCOM_0229730 2.0e-49 beta-glucosidase, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.612
EKX96153.1
Peptidase, M23 family; KEGG: edi:EDI_024060 1.8e-18 trichohyalin K13173; Psort location: Cytoplasmic, score: 9.26.
   
   0.607
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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