STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00798.1ATPase, AAA family; KEGG: cch:Cag_0626 7.3e-110 recombination factor protein RarA K07478; Psort location: Cytoplasmic, score: 9.97. (425 aa)    
Predicted Functional Partners:
EKY03129.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 
 0.771
EKY02854.1
Hypothetical protein.
   
 
 0.735
EKY00799.1
KEGG: pru:PRU_0689 1.4e-97 hprA; glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.26; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.677
EKX99321.1
KEGG: pru:PRU_0554 1.6e-215 RecQ family ATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.643
EKX96911.1
KEGG: pmz:HMPREF0659_A6179 3.6e-298 recQ; ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.643
EKY00797.1
Hypothetical protein; KEGG: ptr:737144 0.0018 ubiquinol-cytochrome c reductase binding protein pseudogene; K00417 ubiquinol-cytochrome c reductase subunit 7.
       0.642
EKY00796.1
Xaa-His dipeptidase; KEGG: pru:PRU_0766 3.5e-181 pepD_1; Xaa-His dipeptidase K01270; Psort location: Cytoplasmic, score: 8.96.
       0.629
EKX98167.1
Helicase protein; KEGG: lsp:Bsph_0793 3.8e-17 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.537
EKX99289.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.8e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
 
   
 0.534
EKY00800.1
Hypothetical protein; KEGG: cco:CCC13826_1380 3.8e-17 thioredoxin reductase (TrxR); Psort location: CytoplasmicMembrane, score: 10.00.
       0.511
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.