STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00799.1KEGG: pru:PRU_0689 1.4e-97 hprA; glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.26; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (319 aa)    
Predicted Functional Partners:
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.931
EKX99724.1
KDPG and KHG aldolase; KEGG: pdi:BDI_3185 3.8e-81 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625; Psort location: Cytoplasmic, score: 9.97.
    
  0.835
EKX98444.1
KEGG: cpb:Cphamn1_0484 1.0e-30 HAD-superfamily hydrolase, subfamily IA, variant 1; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 9.97.
     
  0.829
EKX99565.1
KEGG: pmz:HMPREF0659_A6863 0. malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
   
 0.749
EKY00798.1
ATPase, AAA family; KEGG: cch:Cag_0626 7.3e-110 recombination factor protein RarA K07478; Psort location: Cytoplasmic, score: 9.97.
       0.677
EKY03283.1
KEGG: pmz:HMPREF0659_A6812 2.2e-124 putative D-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 
0.673
EKY02824.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.667
EKX97521.1
KEGG: pmz:HMPREF0659_A6381 1.2e-267 2-oxoacid:acceptor oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
     
 0.600
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
   
 
 0.588
EKY00800.1
Hypothetical protein; KEGG: cco:CCC13826_1380 3.8e-17 thioredoxin reductase (TrxR); Psort location: CytoplasmicMembrane, score: 10.00.
       0.584
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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