STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00754.1TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52. (1064 aa)    
Predicted Functional Partners:
EKY00755.1
SusD family protein.
 
 
   0.950
EKX98762.1
SusD family protein.
  
 
   0.876
EKY03587.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.804
EKY02987.1
SusD family protein.
  
 
   0.799
EKY03580.1
SusD family protein.
  
 
   0.798
EKX99827.1
SusD family protein.
 
 
   0.748
EKY01000.1
SusD family protein.
  
 
   0.734
EKX97257.1
SusD family protein.
  
 
   0.714
EKY03096.1
SusD family protein.
  
 
   0.711
EKY01974.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.689
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.