Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00735.1Hypothetical protein; KEGG: eam:EAMY_2988 0.00028 putative O-acetyltransferase SAV0974); Psort location: CytoplasmicMembrane, score: 10.00. (386 aa)    
Predicted Functional Partners:
EKY00737.1
Prenyltransferase, UbiA family; KEGG: clj:CLJU_c13310 1.8e-44 ubiA; putative 4-hydroxybenzoate polyprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.826
EKY00736.1
Acyltransferase; KEGG: mbo:Mb1286 3.7e-10 acyltransferase K00680; Psort location: CytoplasmicMembrane, score: 10.00.
       0.825
EKY00734.1
Arylsulfatase; KEGG: pmz:HMPREF0659_A5230 3.2e-196 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.620
EKY02982.1
Chain length determinant protein; KEGG: pgi:PG0436 1.1e-108 capsular polysaccharide transport protein, putative; K00903 protein-tyrosine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.400
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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