Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY00546.1uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (248 aa)    
Predicted Functional Partners:
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
 
     0.856
EKY00547.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.825
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.771
EKY00512.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.687
EKX96444.1
KEGG: srm:SRM_02163 1.6e-75 GH3; GH3 auxin-responsive promoter superfamily; Psort location: Cytoplasmic, score: 8.96.
  
     0.661
EKY03892.1
Hypothetical protein; KEGG: tte:TTE1510 7.1e-05 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
  
     0.655
EKX99536.1
KEGG: abu:Abu_1717 0.00065 hsdM; type I restriction-modification system, M subunit, putative.
  
     0.639
EKX99613.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.638
EKX95919.1
Hypothetical protein.
 
     0.625
EKY00987.1
Hypothetical protein; KEGG: tvo:TVN0199 0.00049 N-acetylglucosamine kinase; K00884 N-acetylglucosamine kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.624
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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