STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00517.1KEGG: sat:SYN_00150 1.9e-24 heme export protein apocytochrome heme-lyase; Psort location: CytoplasmicMembrane, score: 10.00. (262 aa)    
Predicted Functional Partners:
EKY00518.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.989
EKY00519.1
Nitrite reductase; KEGG: pmz:HMPREF0659_A5771 3.0e-200 nrfA; nitrite reductase (cytochrome; ammonia-forming) K03385; Belongs to the cytochrome c-552 family.
 
   
 0.827
EKY00520.1
KEGG: pmz:HMPREF0659_A5772 1.6e-73 nrfH; cytochrome c nitrate reductase, small subunit; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.788
EKX99633.1
Respiratory-chain NADH dehydrogenase, subunit.
   
  
 0.638
EKY03623.1
Redoxin family protein; KEGG: cby:CLM_0322 1.3e-09 antioxidant, AhpC/TSA family; Psort location: CytoplasmicMembrane, score: 9.97.
  
  
 0.579
EKY00546.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.503
purL
Putative phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
 
   
 0.445
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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