STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00520.1KEGG: pmz:HMPREF0659_A5772 1.6e-73 nrfH; cytochrome c nitrate reductase, small subunit; Psort location: CytoplasmicMembrane, score: 9.82. (199 aa)    
Predicted Functional Partners:
EKY00519.1
Nitrite reductase; KEGG: pmz:HMPREF0659_A5771 3.0e-200 nrfA; nitrite reductase (cytochrome; ammonia-forming) K03385; Belongs to the cytochrome c-552 family.
 
 0.997
EKY02665.1
Glutamate--ammonia ligase, catalytic domain protein; Belongs to the glutamine synthetase family.
  
  
 0.872
EKY00518.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.857
EKY00018.1
KEGG: pmz:HMPREF0659_A5221 0. glnA; glutamate--ammonia ligase, catalytic domain protein K01915; Psort location: Cytoplasmic, score: 8.96; Belongs to the glutamine synthetase family.
     
  0.829
EKY00517.1
KEGG: sat:SYN_00150 1.9e-24 heme export protein apocytochrome heme-lyase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.788
EKY02666.1
Hypothetical protein.
 
   0.737
EKY03894.1
KEGG: pmz:HMPREF0659_A5590 4.1e-203 gdh_2; glutamate dehydrogenase, NAD-specific K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.618
EKY01214.1
KEGG: pmz:HMPREF0659_A5353 6.5e-212 gdh_1; glutamate dehydrogenase, NAD-specific K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.618
EKX96355.1
KEGG: pmz:HMPREF0659_A5048 0. sdhA; succinate dehydrogenase flavoprotein subunit K00239; Psort location: CytoplasmicMembrane, score: 7.88.
     
 0.438
EKY03470.1
Transporter, major facilitator family protein; KEGG: bmd:BMD_0780 2.6e-08 narK; nitrite extrusion protein K02575; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.437
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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