Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00452.1KEGG: apb:SAR116_1837 7.9e-08 phage integrase family protein K03733; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (409 aa)    
Predicted Functional Partners:
EKY00453.1
Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
    
0.819
EKY00476.1
Hypothetical protein.
  
     0.725
EKY04365.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A7234 4.8e-42 phage lysozyme; Psort location: Cytoplasmic, score: 8.96.
  
    0.624
EKY00472.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.616
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
  0.548
EKY04364.1
Conjugative transposon protein TraQ family protein.
  
     0.543
EKY00463.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.533
EKY02076.1
Hypothetical protein; KEGG: tin:Tint_2201 1.0e-05 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.514
EKY04360.1
Conjugative transposon TraM protein; Psort location: OuterMembrane, score: 9.49.
  
     0.495
EKY04361.1
Conjugative transposon TraN protein.
  
     0.489
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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