STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00454.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (315 aa)    
Predicted Functional Partners:
EKY00455.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.795
EKY00456.1
Hypothetical protein; KEGG: fph:Fphi_1326 0.0038 exodeoxyribonuclease V, gamma subunit; K03583 exodeoxyribonuclease V gamma subunit; Psort location: Cytoplasmic, score: 8.96.
       0.795
EKY00458.1
Hypothetical protein.
       0.782
EKY00457.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKY00459.1
Hypothetical protein; KEGG: cco:CCC13826_1843 1.8e-17 thiD; phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKY00460.1
Hypothetical protein; KEGG: cco:CCC13826_1843 1.6e-11 thiD; phosphomethylpyrimidine kinase.
       0.580
EKY00461.1
DJ-1/PfpI family protein; KEGG: sto:ST0890 2.7e-09 protease I; K05520 protease I; Psort location: Cytoplasmic, score: 8.96.
       0.573
EKY00462.1
Hypothetical protein.
       0.515
EKY00463.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.488
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.