STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00464.1Transcriptional regulator, AraC family; KEGG: cbb:CLD_0121 1.7e-06 methylphosphotriester-DNA alkyltransferase K13530; Psort location: Cytoplasmic, score: 9.97. (282 aa)    
Predicted Functional Partners:
EKY00463.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.729
EKY00465.1
KEGG: rlt:Rleg2_4805 1.9e-42 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.602
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
  0.595
EKY00466.1
Hypothetical protein.
       0.529
EKY00460.1
Hypothetical protein; KEGG: cco:CCC13826_1843 1.6e-11 thiD; phosphomethylpyrimidine kinase.
 
     0.528
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.519
EKY00459.1
Hypothetical protein; KEGG: cco:CCC13826_1843 1.8e-17 thiD; phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 8.96.
 
     0.516
EKX99565.1
KEGG: pmz:HMPREF0659_A6863 0. malate dehydrogenase (oxaloacetate-decarboxylating) K00029; Psort location: Cytoplasmic, score: 9.97.
     
 0.491
EKY00467.1
RteC protein.
       0.485
EKY00462.1
Hypothetical protein.
 
     0.484
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.