STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00467.1RteC protein. (108 aa)    
Predicted Functional Partners:
EKY00476.1
Hypothetical protein.
  
     0.723
EKY00466.1
Hypothetical protein.
       0.715
EKY04346.1
Hypothetical protein.
  
     0.701
EKY00465.1
KEGG: rlt:Rleg2_4805 1.9e-42 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.701
EKY04369.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.664
EKY00451.1
Hypothetical protein; KEGG: apb:SAR116_1915 0.0038 tyrosine recombinase XerD K04763.
  
     0.640
EKY02580.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
 
     0.619
EKY04363.1
Hypothetical protein; KEGG: shi:Shel_09410 1.2e-08 DNA primase, catalytic core; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
     0.618
EKY02669.1
Hypothetical protein.
  
     0.606
EKY04362.1
Hypothetical protein.
  
     0.574
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.