STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00080.1Outer membrane efflux protein. (454 aa)    
Predicted Functional Partners:
EKY00081.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 7.1e-06 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.976
EKY00078.1
Heavy metal efflux pump, CzcA family; KEGG: dat:HRM2_00450 1.3e-188 rndA; RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.958
EKY00079.1
Hypothetical protein.
       0.689
EKX99520.1
Hypothetical protein.
   
  0.568
EKX97860.1
Hypothetical protein; KEGG: apb:SAR116_2008 2.8e-05 secretion protein HlyD.
   
  0.568
EKY00082.1
Heavy metal-associated domain protein; KEGG: efa:EF0298 9.8e-07 copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase.
  
    0.520
EKY03981.1
Outer membrane efflux protein; KEGG: dba:Dbac_2651 0.0034 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: OuterMembrane, score: 9.92.
  
  0.478
EKY00077.1
Hypothetical protein.
       0.454
EKY03979.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 2.8e-12 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.444
EKY02894.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.1e-15 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.444
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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