Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY00056.1OmpA family protein; KEGG: apb:SAR116_2281 8.8e-16 flagellar motor protein K02557. (280 aa)    
Predicted Functional Partners:
EKY02866.1
Hypothetical protein.
  
 
 0.746
EKX98130.1
Hypothetical protein; KEGG: bba:Bd3413 0.0013 ABC transporter substrate binding protein K02067; Psort location: CytoplasmicMembrane, score: 9.82.
   
   0.665
EKY00055.1
Putative membrane protein; KEGG: apb:SAR116_2175 8.8e-06 RarD protein, DMT superfamily transporter K05786; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.561
EKX99610.1
Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 6.0e-12 YajC K03210.
    
 
 0.538
EKX96153.1
Peptidase, M23 family; KEGG: edi:EDI_024060 1.8e-18 trichohyalin K13173; Psort location: Cytoplasmic, score: 9.26.
  
     0.532
EKX99124.1
M6 family metalloprotease domain protein; KEGG: pin:Ping_2144 1.2e-10 peptidase M6, immune inhibitor A; K09607 immune inhibitor A.
  
  
 0.513
EKX98459.1
Hypothetical protein.
  
  
 0.513
EKX96859.1
Hypothetical protein.
  
  
 0.513
EKY03309.1
Putative peptidase Do; KEGG: pmz:HMPREF0659_A5577 1.3e-181 peptidase Do; Psort location: Periplasmic, score: 9.76.
   
   0.511
EKY00065.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
   
   0.508
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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