Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY00018.1KEGG: pmz:HMPREF0659_A5221 0. glnA; glutamate--ammonia ligase, catalytic domain protein K01915; Psort location: Cytoplasmic, score: 8.96; Belongs to the glutamine synthetase family. (729 aa)    
Predicted Functional Partners:
EKY02665.1
Glutamate--ammonia ligase, catalytic domain protein; Belongs to the glutamine synthetase family.
    
 0.860
EKX99626.1
Glutamate synthase; KEGG: pru:PRU_0699 0. gltA_1; glutamate synthase K00266; Psort location: Cytoplasmic, score: 9.97.
    
 0.847
carA
KEGG: pmz:HMPREF0659_A5880 6.0e-170 carA; carbamoyl-phosphate synthase, small subunit K01956; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
 
  0.839
EKX98776.1
KEGG: pmz:HMPREF0659_A5881 1.2e-251 class II glutamine amidotransferase; K00764 amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96.
    
  0.836
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.830
EKY03303.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
  0.829
EKY00519.1
Nitrite reductase; KEGG: pmz:HMPREF0659_A5771 3.0e-200 nrfA; nitrite reductase (cytochrome; ammonia-forming) K03385; Belongs to the cytochrome c-552 family.
     
  0.829
EKY00520.1
KEGG: pmz:HMPREF0659_A5772 1.6e-73 nrfH; cytochrome c nitrate reductase, small subunit; Psort location: CytoplasmicMembrane, score: 9.82.
     
  0.829
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
     
  0.829
EKX98774.1
KEGG: pmz:HMPREF0659_A5879 0. carB; carbamoyl-phosphate synthase, large subunit K01955; Psort location: Cytoplasmic, score: 9.97.
     
  0.829
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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