Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY00029.1Outer membrane lipoprotein carrier protein LolA. (204 aa)    
Predicted Functional Partners:
EKY00028.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.816
EKX96154.1
Hypothetical protein.
  
 
 
 0.800
EKY00030.1
FtsK/SpoIIIE family protein; KEGG: apb:SAR116_1808 4.3e-89 DNA segregation ATPase FtsK/SpoIIIE K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.783
EKY00794.1
Outer membrane protein.
  
     0.698
EKY04297.1
Hypothetical protein.
  
     0.693
EKY02937.1
OmpA family protein; KEGG: apb:SAR116_2300 3.3e-09 peptidoglycan-associated lipoprotein K03640; Psort location: OuterMembrane, score: 9.93.
 
 
 0.680
EKX99541.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.661
EKX98300.1
Bacteroidetes-specific putative membrane protein.
  
     0.658
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.634
EKY00031.1
3'-5' exonuclease; KEGG: pmz:HMPREF0659_A6957 9.1e-64 3'-5' exonuclease; Psort location: Cytoplasmic, score: 8.96.
  
    0.622
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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