STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY00045.1Hypothetical protein; Psort location: Extracellular, score: 9.65. (504 aa)    
Predicted Functional Partners:
EKY00043.1
SusD family protein.
 
  
  0.944
EKY00042.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
     0.924
EKY00044.1
Hypothetical protein; KEGG: mva:Mvan_3505 0.0079 chitinase, cellulase; K01179 endoglucanase K01183.
       0.783
EKX99124.1
M6 family metalloprotease domain protein; KEGG: pin:Ping_2144 1.2e-10 peptidase M6, immune inhibitor A; K09607 immune inhibitor A.
  
    0.741
EKX97253.1
SusD family protein.
  
  
  0.739
EKY03287.1
Phage minor structural protein.
  
  
  0.725
EKX97252.1
TonB-dependent receptor plug domain protein; KEGG: ddd:Dda3937_04300 4.8e-05 fepA; TonB-dependent receptor; outer membrane receptor for ferrienterochelin and colicins K02014; Psort location: OuterMembrane, score: 10.00.
  
     0.696
EKY04000.1
Ser/Thr phosphatase family protein; KEGG: lpa:lpa_02841 1.1e-07 3',5'-cyclic-nucleotide phosphodiesterase.
  
  
  0.690
EKY03635.1
Hypothetical protein; KEGG: pfr:PFREUD_10120 1.3e-07 exopolysaccharide biosynthesis protein precursor (related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor).
  
  
  0.665
EKX99871.1
SusD family protein.
  
  
  0.662
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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