STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99827.1SusD family protein. (546 aa)    
Predicted Functional Partners:
EKX99826.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
 
     0.935
EKX99828.1
Hypothetical protein; KEGG: fsu:Fisuc_2943 3.7e-13 glucuronoarabinoxylan endo-1,4-beta-xylanase; Psort location: Extracellular, score: 9.64.
 
     0.859
EKY03588.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 2.2e-05 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
  
 
   0.786
EKX97109.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 7.7e-06 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
 
 
   0.779
EKY00999.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.759
EKY02036.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
     0.754
EKY00754.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
 
   0.748
EKX98761.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
  
     0.745
EKX97526.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
  
 
   0.713
EKY03581.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.00015 sulfate/thiosulfate import ATP-binding protein CysA 2 (sulfate-transporting ATPase 2); Psort location: OuterMembrane, score: 9.52.
  
 
   0.711
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.