Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99828.1Hypothetical protein; KEGG: fsu:Fisuc_2943 3.7e-13 glucuronoarabinoxylan endo-1,4-beta-xylanase; Psort location: Extracellular, score: 9.64. (533 aa)    
Predicted Functional Partners:
EKX99603.1
Glycosyl hydrolase, family 43; KEGG: bde:BDP_0131 1.9e-37 endo-1,4-beta-xylanase; Psort location: OuterMembrane, score: 9.49.
 
 
 0.889
EKX99827.1
SusD family protein.
 
     0.859
EKX99829.1
Glycosyl hydrolase family 35; KEGG: pru:PRU_0082 3.3e-297 putative beta-galactosidase; K12308 beta-galactosidase.
 
 0.830
EKX99826.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
 
     0.797
EKX99522.1
Carbohydrate binding domain protein; KEGG: ote:Oter_0330 2.6e-130 alpha-N-arabinofuranosidase.
  
  
  0.728
EKY00555.1
Carbohydrate binding domain protein.
  
  
  0.718
EKY03936.1
Hypothetical protein; KEGG: bth:BT_2900 0.0020 arabinan endo-1,5-alpha-L-arabinosidase A precursor; K06113 arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.711
EKY03934.1
Glycosyl hydrolase, family 88; KEGG: bsu:BSU30120 1.3e-14 yteR; unsaturated rhamnogalacturonyl hydrolase.
  
 
  0.681
EKX99825.1
Hypothetical protein.
       0.681
EKY02848.1
Carbohydrate binding domain protein.
  
  
  0.599
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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