STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99756.1RecF/RecN/SMC protein; KEGG: fnu:FN0522 7.9e-16 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.96. (722 aa)    
Predicted Functional Partners:
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.982
EKX99754.1
Helicase protein; KEGG: hvo:HVO_1598 3.2e-12 rad25c; DNA repair helicase RAD25; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.963
EKX99753.1
Hypothetical protein; KEGG: mfs:MFS40622_0438 6.7e-06 phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.956
EKX99751.1
Hypothetical protein.
 
     0.955
EKX99752.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.955
EKY02854.1
Hypothetical protein.
  
 0.931
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
 0.923
EKX98167.1
Helicase protein; KEGG: lsp:Bsph_0793 3.8e-17 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.874
EKX99757.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.825
EKX99755.1
Hypothetical protein.
       0.811
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.