Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKX99720.1KEGG: dtu:Dtur_0663 7.4e-16 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 8.96. (354 aa)    
Predicted Functional Partners:
EKY02033.1
Sugar-binding domain protein; KEGG: dfe:Dfer_2837 1.0e-57 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.748
EKX97270.1
Sugar-binding domain protein.
  
     0.720
EKX99719.1
Na+/H+ antiporter family protein; KEGG: bli:BL01947 0.0013 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
       0.697
EKX99725.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aci:ACIAD0595 3.8e-11 putative sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.646
EKX99718.1
KEGG: pru:PRU_0878 2.8e-85 family 25 glycosyl hydrolase.
       0.552
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
   0.547
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.547
EKY03445.1
Oxidoreductase, NAD-binding domain protein; KEGG: swo:Swol_0706 1.3e-25 putative oxidoreductase; K13020 UDP-D-GlcNAcA oxidase.
  
     0.504
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.476
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.472
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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