Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKX99726.1Response regulator receiver domain protein; KEGG: ava:Ava_B0209 2.0e-06 two component LuxR family transcriptional regulator K02479; Psort location: Cytoplasmic, score: 8.96. (241 aa)    
Predicted Functional Partners:
EKX99725.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aci:ACIAD0595 3.8e-11 putative sensory transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.992
EKX96221.1
Response regulator receiver domain protein; KEGG: dfe:Dfer_0792 2.5e-148 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.878
EKY02829.1
Response regulator receiver domain protein.
  
 0.862
EKX99727.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.825
EKY02332.1
Hypothetical protein.
  
     0.744
EKY01437.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dfe:Dfer_1574 2.4e-80 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.729
EKY02701.1
Hypothetical protein; KEGG: pdi:BDI_0184 2.1e-87 peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D.
  
   
 0.719
EKY01822.1
GtrA-like protein; KEGG: azo:azo2380 0.0029 glycosyltransferase K00754; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.705
EKY02333.1
Tetratricopeptide repeat protein; KEGG: bcy:Bcer98_3248 0.0037 pheT; phenylalanyl-tRNA synthetase subunit beta K01890.
  
    0.698
EKX98443.1
PAP2 family protein; KEGG: nca:Noca_2059 0.0019 undecaprenyl-diphosphatase K06153; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.698
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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