Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKX99649.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
EKX99650.1
KEGG: pmz:HMPREF0659_A5999 2.1e-151 amidohydrolase family protein; K01465 dihydroorotase; Psort location: Cytoplasmic, score: 9.97.
       0.825
EKX99651.1
Vitamin B12 dependent methionine synthase, activation domain protein; KEGG: pdi:BDI_0415 7.1e-53 putative 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.795
EKY02888.1
Sporulation and cell division repeat protein.
  
     0.772
EKY03427.1
Hypothetical protein.
  
     0.771
EKY02012.1
Hypothetical protein.
  
     0.768
EKY02332.1
Hypothetical protein.
  
     0.767
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.766
EKY02029.1
Hypothetical protein.
  
    0.764
EKY03444.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.763
EKY02701.1
Hypothetical protein; KEGG: pdi:BDI_0184 2.1e-87 peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D.
  
     0.757
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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