Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99660.1KEGG: pmz:HMPREF0659_A7396 4.3e-25 glycosyltransferase, group 2 family protein. (298 aa)    
Predicted Functional Partners:
EKX99662.1
Hypothetical protein; KEGG: api:7055882 0.00049 ND4; NADH dehydrogenase subunit 4; K03881 NADH dehydrogenase I subunit 4; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.692
EKY02358.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.667
EKX99661.1
Chain length determinant protein; KEGG: bpm:BURPS1710b_A1960 4.8e-05 putative transport-related membrane protein K00903.
  
    0.660
EKX99665.1
Hypothetical protein; KEGG: cbe:Cbei_4631 2.0e-06 LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.646
EKX99663.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.644
EKX99664.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.644
EKX99659.1
Polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 5.4e-11 cytosol aminopeptidase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.628
EKX98503.1
KEGG: pmz:HMPREF0659_A7272 2.9e-83 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.598
EKX96105.1
KEGG: pmz:HMPREF0659_A5905 2.2e-78 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.572
EKX99481.1
Hypothetical protein; KEGG: bce:BC0314 8.3e-23 glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
     0.547
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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