STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99604.1KEGG: bvu:BVU_0533 3.4e-57 acid phosphatase; K09474 acid phosphatase (class A); Psort location: Periplasmic, score: 9.76. (243 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.668
EKX99606.1
S4 domain protein; KEGG: mct:MCR_0729 1.5e-13 heat shock protein 15 K04762; Psort location: Cytoplasmic, score: 9.97.
       0.654
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
       0.654
rplY
Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.645
EKY04293.1
KEGG: pru:PRU_1369 8.2e-79 ribE; riboflavin synthase subunit alpha K00793; Psort location: Cytoplasmic, score: 9.97.
     
  0.573
EKX98910.1
KEGG: pmz:HMPREF0659_A7207 7.8e-74 ribF; riboflavin biosynthesis protein RibF K11753; Psort location: Cytoplasmic, score: 9.97.
     
  0.573
EKY00791.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.500
EKX98134.1
Nitroreductase family protein; KEGG: bth:BT_2144 1.3e-80 putative oxidoreductase; K00540; Belongs to the flavin oxidoreductase frp family.
  
  
  0.410
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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