STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99611.1YbbR-like protein; Psort location: Cytoplasmic, score: 8.96. (328 aa)    
Predicted Functional Partners:
EKX99609.1
Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
 
     0.865
EKX99613.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.829
EKX99610.1
Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 6.0e-12 YajC K03210.
       0.825
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.819
EKY00022.1
7TM receptor with intracellular HD hydrolase; KEGG: bmd:BMD_4538 2.4e-63 metal-dependent phosphohydrolase K07037; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.744
EKY04288.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.737
EKY03886.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.737
EKX96443.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.729
EKX96219.1
Gliding motility-associated lipoprotein GldH.
  
     0.721
EKY01998.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.707
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.