Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX99618.1Peptidase, M48 family; KEGG: pmz:HMPREF0659_A5502 3.1e-86 peptidase, M48 family. (334 aa)    
Predicted Functional Partners:
EKX99617.1
Mrp-like family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.709
EKX99619.1
Nodulation efficiency protein D; Psort location: CytoplasmicMembrane, score: 9.46.
       0.666
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.605
EKX99620.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.7e-53 membrane protease subunits, stomatin/prohibitin homologs.
       0.599
EKX99616.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
       0.517
EKX96153.1
Peptidase, M23 family; KEGG: edi:EDI_024060 1.8e-18 trichohyalin K13173; Psort location: Cytoplasmic, score: 9.26.
    
   0.517
EKX99621.1
Hypothetical protein.
       0.468
EKY03866.1
KEGG: cyb:CYB_1515 9.2e-06 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
   
 0.456
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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