Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX99572.1Citrate transporter; Psort location: CytoplasmicMembrane, score: 10.00. (460 aa)    
Predicted Functional Partners:
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.747
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
       0.570
EKX99575.1
KEGG: pmz:HMPREF0659_A6487 7.5e-21 ATP synthase, delta/epsilon chain, beta-sandwich domain protein; K02114 F-type H+-transporting ATPase subunit epsilon.
       0.524
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
  
    0.489
EKX99571.1
Sigma-70 region 2; KEGG: reh:H16_A1096 5.8e-14 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K03088; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the sigma-70 factor family. ECF subfamily.
       0.429
EKX97309.1
OmpA family protein.
  
     0.427
EKX99576.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.426
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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