Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX99486.1KEGG: pru:PRU_2913 1.3e-263 msbA; lipid A export permease/ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00. (613 aa)    
Predicted Functional Partners:
EKX99483.1
KEGG: pmz:HMPREF0659_A6393 2.0e-114 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.811
EKX99484.1
Arylsulfatase; KEGG: fps:FP0883 4.8e-129 phosphoglycerol transferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.753
EKX99482.1
Hypothetical protein.
       0.696
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.609
EKX98167.1
Helicase protein; KEGG: lsp:Bsph_0793 3.8e-17 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.593
EKX99485.1
Hypothetical protein.
       0.572
EKX96553.1
KEGG: pyo:PY02151 0.0087 hypothetical protein; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
     
  0.522
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
   0.515
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
   
 0.507
EKX99481.1
Hypothetical protein; KEGG: bce:BC0314 8.3e-23 glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.495
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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