Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKX99494.1KEGG: pmz:HMPREF0659_A6906 2.0e-233 S1 RNA binding domain protein; K08301 ribonuclease G; Psort location: Cytoplasmic, score: 9.97. (524 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.897
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 0.798
EKY02647.1
Hypothetical protein; KEGG: apb:SAR116_1265 3.4e-12 predicted P-loop-containing kinase K06958; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.755
EKX99495.1
Sporulation and cell division repeat protein.
  
    0.614
EKX98167.1
Helicase protein; KEGG: lsp:Bsph_0793 3.8e-17 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.582
EKX99493.1
DNA-binding protein HU; KEGG: apb:SAR116_0125 4.4e-09 histone family protein DNA-binding protein K03530; Belongs to the bacterial histone-like protein family.
       0.563
EKY02331.1
KEGG: phe:Phep_1011 4.6e-76 DEAD/DEAH box helicase domain protein; K05591 ATP-independent RNA helicase DbpA; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.554
EKX98920.1
Putative cold-shock DEAD-box protein A; KEGG: pmz:HMPREF0659_A5094 2.0e-242 putative ATP-dependent RNA helicase DeaD; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
    
 
 0.554
EKX97096.1
DEAD/DEAH box helicase; KEGG: sth:STH1647 4.8e-74 ATP-dependent RNA helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
    
 
 0.554
EKX99496.1
FHA domain protein; Psort location: Cytoplasmic, score: 8.96.
     
 0.511
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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