Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99501.1ParB-like protein; KEGG: cti:RALTA_A3100 4.4e-48 parB1; exonuclease involved in chromosome partitioning, ParB protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family. (297 aa)    
Predicted Functional Partners:
EKX99502.1
Sporulation initiation inhibitor protein Soj; KEGG: har:HEAR3415 1.2e-63 soj; chromosome partitioning protein K03496; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.964
EKX99500.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.825
EKX99499.1
KEGG: pru:PRU_0014 5.3e-139 transglycosylase SLT/LysM domain-containing protein; K08307 membrane-bound lytic murein transglycosylase D.
     
 0.720
EKX98589.1
KEGG: pmz:HMPREF0659_A6944 0. homoserine dehydrogenase K12524; Psort location: CytoplasmicMembrane, score: 8.46.
  
 
  0.675
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
 
  
 0.669
EKX99498.1
Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.661
EKY00030.1
FtsK/SpoIIIE family protein; KEGG: apb:SAR116_1808 4.3e-89 DNA segregation ATPase FtsK/SpoIIIE K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.659
EKY04224.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.604
EKY03576.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
  
 
 0.604
EKY03335.1
Hypothetical protein.
  
 
 0.604
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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