STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKX99502.1Sporulation initiation inhibitor protein Soj; KEGG: har:HEAR3415 1.2e-63 soj; chromosome partitioning protein K03496; Psort location: CytoplasmicMembrane, score: 7.88. (254 aa)    
Predicted Functional Partners:
EKX99501.1
ParB-like protein; KEGG: cti:RALTA_A3100 4.4e-48 parB1; exonuclease involved in chromosome partitioning, ParB protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
 
 
 0.964
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.652
EKX99500.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.644
EKX99504.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.594
EKX99499.1
KEGG: pru:PRU_0014 5.3e-139 transglycosylase SLT/LysM domain-containing protein; K08307 membrane-bound lytic murein transglycosylase D.
       0.578
EKX99498.1
Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.542
EKY03513.1
Hypothetical protein; KEGG: gfo:GFO_2701 1.1e-14 transmembrane family-2 glycosyl transferase K00754; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.482
EKY02009.1
KEGG: pmz:HMPREF0659_A6220 2.0e-132 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.46.
   
 
 0.482
EKY03884.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.471
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.432
Your Current Organism:
Prevotella saccharolytica
NCBI taxonomy Id: 1127699
Other names: P. saccharolytica F0055, Prevotella saccharolytica F0055, Prevotella saccharolytica str. F0055, Prevotella saccharolytica strain F0055
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